STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
soxCSulfur oxidation molybdopterin protein SoxC. (425 aa)    
Predicted Functional Partners:
soxD
Sulfite dehydrogenase cytochrome subunit SoxD.
 
 
 0.989
soxB
Sulfur oxidation protein SoxB; Belongs to the 5'-nucleotidase family.
 
  
 0.969
soxA
Sulfur oxidation protein SoxA.
 
 
 0.965
soxZ
Sulfur oxidation protein SoxZ.
 
  
 0.958
soxY
Sulfur oxidation protein SoxY.
 
  
 0.957
soxX
Sulfur oxidation protein SoxX.
 
 
 0.913
CSIRO_2123
Sulfide dehydrogenase flavoprotein chain precursor.
 
 
 0.887
CSIRO_2124
Cytochrome c2.
  
 0.798
CSIRO_3420
Quino(hemo)protein alcohol dehydrogenase.
   
 0.795
soxW
Thioredoxin SoxW.
 
     0.782
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.