STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_2121Hypothetical protein. (37 aa)    
Predicted Functional Partners:
CSIRO_2123
Sulfide dehydrogenase flavoprotein chain precursor.
   
 0.994
ccoO
Cytochrome c oxidase subunit CcoO.
  
 0.953
ccoN
Cytochrome c oxidase subunit CcoN; Belongs to the heme-copper respiratory oxidase family.
  
 0.951
CSIRO_1723
Ubiquinol--cytochrome c reductase cytochrome B subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 
 0.873
CSIRO_3420
Quino(hemo)protein alcohol dehydrogenase.
  
 
 0.741
CSIRO_3947
Fe-S protein.
    
 0.713
soxD
Sulfite dehydrogenase cytochrome subunit SoxD.
  
 
 0.703
soxB
Sulfur oxidation protein SoxB; Belongs to the 5'-nucleotidase family.
    
 0.700
CSIRO_2122
Hypothetical protein.
       0.693
CSIRO_1943
Tungsten-containing formate dehydrogenase beta subunit.
   
 
  0.687
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.