Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
hmgAHomogentisate 1,2-dioxygenase; Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate. (448 aa)    
Predicted Functional Partners:
CSIRO_2131
Maleylacetoacetate isomerase/ glutathione S-transferase zeta class; Bifunctional.
 
 
 0.995
CSIRO_2134
4-hydroxyphenylpyruvate dioxygenase.
 
 0.993
CSIRO_2132
Fumarylacetoacetase.
 
 
 0.990
CSIRO_1864
Fumarylacetoacetase.
 
 
 0.960
CSIRO_2127
Putative 3-(3-hydroxy-phenyl)propionate hydroxylase.
 
  
 0.945
CSIRO_2129
Beta-lactamase-like protein.
 
     0.931
CSIRO_2128
Hypothetical protein.
 
     0.901
CSIRO_1178
Protein of unknown function DUF1446.
  
 0.883
CSIRO_2126
Transcriptional regulator, MarR family.
 
     0.814
CSIRO_1029
Pterin-4-alpha-carbinolamine dehydratase.
  
  
 0.645
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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