Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CSIRO_2143High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1); Belongs to the binding-protein-dependent transport system permease family. (284 aa)    
Predicted Functional Partners:
CSIRO_2142
Branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  0.976
CSIRO_2144
ABC transporter substrate-binding protein.
 
 
  0.915
CSIRO_1434
Branched-chain amino acid transport system permease; Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.907
CSIRO_2005
ABC transporter ATP-binding/permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.898
CSIRO_1872
Branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.897
CSIRO_3969
ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  0.887
CSIRO_2060
Branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  0.871
CSIRO_3990
Branched-chain amino acid transport system permease; Belongs to the binding-protein-dependent transport system permease family.
  
 
  0.871
CSIRO_1240
Benzoate transport protein, inner-membrane translocator precursor; Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.870
CSIRO_2206
Branched-chain amino acid transport ATP-binding protein; Overlaps another CDS with the same product name; Belongs to the binding-protein-dependent transport system permease family.
 
  0.866
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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