Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_2156Transcriptional regulator, GntR family. (266 aa)    
Predicted Functional Partners:
CSIRO_3946
Transcriptional regulator, GntR family.
  
  
 0.702
CSIRO_1679
Transcriptional regulator, GntR family.
  
  
 0.691
CSIRO_2418
Hypothetical protein.
  
  
 0.610
CSIRO_2074
Transcriptional regulator, GntR family.
  
  
 0.590
CSIRO_2257
Altronate hydrolase.
 
   
 0.505
hmuV
ABC-type hemin transport system; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system.
       0.483
CSIRO_4177
Transcriptional regulator; Associated with tricarboxylic transport.
  
  
 0.482
CSIRO_2158
Hemin ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
       0.469
CSIRO_2365
Sensory box histidine kinase/response regulator.
     
 0.469
CSIRO_2155
ABC transporter substrate-binding protein.
       0.466
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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