STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_2161TonB-dependent hemin ferrichrome receptor. (789 aa)    
Predicted Functional Partners:
tolA-2
TolA protein.
    
 
 0.875
CSIRO_3901
Hypothetical protein.
    
 
 0.875
CSIRO_2159
Periplasmic hemin-binding protein.
 
  
 0.837
CSIRO_1226
Putative energy transducer TonB.
 
 0.833
CSIRO_2163
Putative heme iron utilization protein.
 
  
 0.775
hmuV
ABC-type hemin transport system; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system.
 
  
 0.754
CSIRO_0483
TolA protein.
 
 0.751
CSIRO_3361
TolA protein.
 
 0.744
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
     
 0.723
CSIRO_2158
Hemin ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
 0.715
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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