Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_2161TonB-dependent hemin ferrichrome receptor. (789 aa)    
Predicted Functional Partners:
CSIRO_1226
Putative energy transducer TonB.
 
 0.890
CSIRO_2159
Periplasmic hemin-binding protein.
 
  
 0.876
CSIRO_0483
TolA protein.
 
 0.828
CSIRO_3361
TolA protein.
 
 0.823
CSIRO_2163
Putative heme iron utilization protein.
 
   
 0.818
CSIRO_1978
Hypothetical protein.
  
 0.780
hmuV
ABC-type hemin transport system; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system.
 
  
 0.762
tolA-2
TolA protein.
    
 
 0.742
CSIRO_3901
Hypothetical protein.
    
 
 0.742
CSIRO_2162
Hypothetical protein.
 
    0.734
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.