STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_2185Iron-containing alcohol dehydrogenase. (375 aa)    
Predicted Functional Partners:
CSIRO_3418
S-(hydroxymethyl) glutathione dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
    
 0.967
CSIRO_2662
NAD-dependent malic enzyme.
   
 
 0.834
paaN
Phenylacetic acid degradation protein PaaN, ring-opening aldehyde dehydrogenase.
  
 0.825
CSIRO_3432
Indolepyruvate ferredoxin oxidoreductase.
  
 
 0.791
CSIRO_2229
Alcohol dehydrogenase.
  
 0.790
CSIRO_2624
Alcohol dehydrogenase.
  
 0.790
CSIRO_0268
Glutamate synthase (NADPH) large chain.
   
 
 0.777
CSIRO_2425
Biotin carboxylase.
   
 0.777
CSIRO_2230
Putative acetyl-CoA synthetase.
    
 0.714
CSIRO_1307
enoyl-CoA hydratase/ 3-hydroxyacyl-CoA dehydrogenase/ 3-hydroxybutyryl-CoA epimerase; Bifunctional; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.707
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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