STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_2222Hypothetical protein. (137 aa)    
Predicted Functional Partners:
CSIRO_2221
Hypothetical protein.
 0.987
CSIRO_3431
acetyl-CoA acetyltransferase.
 0.945
CSIRO_4088
Thiolase.
 0.943
CSIRO_2220
Short-chain alcohol dehydrogenase-like dehydrogenase.
 
  
  0.850
CSIRO_3429
Putative dehydratase.
 
  0.830
CSIRO_1403
3-ketoacyl-CoA thiolase@ Acetyl-CoA acetyltransferase; Bifunctional; Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.775
CSIRO_0517
3-ketoacyl-CoA thiolase/ acetyl-CoA acetyltransferase; Bifunctional; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.739
CSIRO_0682
acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.739
CSIRO_0701
Beta-ketoadipyl CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.739
CSIRO_1306
3-ketoacyl-CoA thiolase/ acetyl-CoA acetyltransferase; Bifunctional; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.739
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.