STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_2225Hypothetical protein. (440 aa)    
Predicted Functional Partners:
CSIRO_2226
Hypothetical protein.
 
     0.943
CSIRO_2224
Hypothetical protein.
 
     0.803
CSIRO_2934
Sdenylate cyclase.
 
  
  0.780
CSIRO_1808
3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate.
    
  0.718
CSIRO_2223
Glycosyl transferase.
 
     0.680
CSIRO_3865
Hypothetical protein.
  
     0.606
CSIRO_3677
DNA-binding HTH domain-containing protein.
  
     0.597
CSIRO_0610
OmpA-like transmembrane domain-containing protein.
  
     0.574
CSIRO_1897
Hypothetical protein.
  
  
  0.489
CSIRO_0201
Hypothetical protein.
  
     0.472
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.