Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_2229Alcohol dehydrogenase. (351 aa)    
Predicted Functional Partners:
CSIRO_3418
S-(hydroxymethyl) glutathione dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
    
 0.876
CSIRO_0368
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.806
CSIRO_2101
Aldehyde dehydrogenase.
  
 0.806
CSIRO_1957
Alcohol dehydrogenase.
  
 0.791
CSIRO_2185
Iron-containing alcohol dehydrogenase.
  
 0.791
CSIRO_1024
Amine oxidase.
    
  0.768
CSIRO_2624
Alcohol dehydrogenase.
     
  0.768
CSIRO_3420
Quino(hemo)protein alcohol dehydrogenase.
   
 
 0.753
CSIRO_2475
Alcohol dehydrogenase.
 
  
0.717
CSIRO_2040
Glycerol dehydrogenase.
  
  
  0.692
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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