Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_2237Polyhydroxyalkanoic acid synthase. (369 aa)    
Predicted Functional Partners:
CSIRO_2238
Hypothetical protein.
 
     0.920
CSIRO_2236
Hypothetical protein.
  
  
 0.842
CSIRO_0720
Hypothetical protein.
 
  
 0.831
CSIRO_3138
Polyhydroxyalkanoic acid synthase.
  
  
 
0.826
CSIRO_1218
Polyhydroxyalkanoate depolymerase.
 
  
 0.810
CSIRO_0681
acetoacetyl-CoA reductase.
  
  
 0.781
CSIRO_0397
Hypothetical protein.
 
  
 0.720
phbF
PhbF.
 
   
 0.702
CSIRO_1307
enoyl-CoA hydratase/ 3-hydroxyacyl-CoA dehydrogenase/ 3-hydroxybutyryl-CoA epimerase; Bifunctional; Belongs to the enoyl-CoA hydratase/isomerase family.
     
 0.702
CSIRO_1691
enoyl-CoA hydratase/ 3-hydroxyacyl-CoA dehydrogenase/ 3-hydroxybutyryl-CoA epimerase; Bifunctional.
     
 0.702
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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