STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_2238Hypothetical protein. (197 aa)    
Predicted Functional Partners:
CSIRO_2237
Polyhydroxyalkanoic acid synthase.
 
     0.903
CSIRO_2236
Hypothetical protein.
    
  0.813
CSIRO_1448
5-methyltetrahydrofolate--homocysteine methyltransferase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
    
  0.703
CSIRO_3471
Putative transcriptional regulator, TetR family.
  
     0.660
CSIRO_0764
Hypothetical protein.
 
  
  0.657
CSIRO_2235
Carboxyl esterase.
 
  
  0.647
CSIRO_1745
Hypothetical protein.
  
     0.608
CSIRO_0289
DNA helicase.
  
     0.562
CSIRO_3473
Hypothetical protein.
  
     0.556
CSIRO_0717
Hypothetical protein.
  
     0.549
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.