Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_2241Hypothetical protein. (257 aa)    
Predicted Functional Partners:
CSIRO_1991
Wax ester synthase/acyl-CoA:diacylglycerol acyltransferase.
 
     0.745
CSIRO_2232
Hypothetical protein.
 
     0.745
CSIRO_3473
Hypothetical protein.
  
     0.676
CSIRO_2240
Hypothetical protein.
 
     0.563
CSIRO_2238
Hypothetical protein.
 
     0.536
CSIRO_1552
Hypothetical protein.
  
     0.484
CSIRO_1190
Saccharopine dehydrogenase.
  
     0.470
CSIRO_1651
Hypothetical protein.
  
  
  0.425
rnr
3'-to-5' exoribonuclease RNase R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs.
  
    0.417
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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