Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CSIRO_22562,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; Belongs to the HpcH/HpaI aldolase family. (258 aa)    
Predicted Functional Partners:
CSIRO_4042
Putative decarboxylase.
  
 
 0.960
CSIRO_2257
Altronate hydrolase.
 
 
 0.930
CSIRO_2516
D-beta-hydroxybutyrate dehydrogenase.
 
 
 0.728
CSIRO_2255
YbiC-like oxidoreductase; Belongs to the LDH2/MDH2 oxidoreductase family.
 
     0.700
CSIRO_1963
Succinate-semialdehyde dehydrogenase (NADP+); Belongs to the aldehyde dehydrogenase family.
  
 
 0.693
CSIRO_4205
2-ketoglutaric semialdehyde dehydrogenase.
  
 
 0.693
CSIRO_2441
2-hydroxy-3-oxopropionate reductase.
  
 
 0.683
CSIRO_4182
2-hydroxy-3-oxopropionate reductase.
  
 
 0.683
CSIRO_0029
Putative isomerase/decarboxylase.
  
 
 0.679
CSIRO_0030
Putative fumarylacetoacetate hydrolase family protein.
  
 
 0.679
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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