STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_2258Fatty acid desaturase. (323 aa)    
Predicted Functional Partners:
CSIRO_0140
Putative sterol desaturase.
  
 
 0.788
CSIRO_2234
Cytochrome P450.
    
 0.784
CSIRO_0392
Fatty acid desaturase; Bifunctional.
   
 0.743
CSIRO_2257
Altronate hydrolase.
       0.729
CSIRO_1761
Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone.
   
 
 0.721
CSIRO_2280
Phytoene desaturase.
     
 0.716
CSIRO_4275
Putative cytochrome P450 hydroxylase.
 
  
 0.676
CSIRO_2259
Dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family.
       0.664
CSIRO_2223
Glycosyl transferase.
    
 0.651
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
     
 0.648
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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