STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_2318Hypothetical protein. (228 aa)    
Predicted Functional Partners:
CSIRO_2317
RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.
 
 
 0.946
CSIRO_2319
Serine protease precursor.
 
   
 0.820
CSIRO_1312
Hypothetical protein.
  
     0.752
CSIRO_4264
Hypothetical protein.
  
     0.752
CSIRO_2403
Hypothetical protein.
  
     0.743
CSIRO_4095
Hypothetical protein.
  
     0.734
CSIRO_0809
Hypothetical protein.
  
     0.733
CSIRO_2315
Hypothetical protein.
 
     0.730
CSIRO_3668
Hypothetical protein.
  
    0.729
CSIRO_1757
Hypothetical protein.
  
     0.712
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.