STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_2328Hypothetical protein. (115 aa)    
Predicted Functional Partners:
CSIRO_3420
Quino(hemo)protein alcohol dehydrogenase.
     
 0.709
CSIRO_2327
methylmalonyl-CoA mutase.
       0.674
CSIRO_2325
Pyrrolidone-carboxylate peptidase; Removes 5-oxoproline from various penultimate amino acid residues except L-proline.
 
     0.649
CSIRO_3418
S-(hydroxymethyl) glutathione dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
    
 0.625
CSIRO_2326
G3E family GTPase.
       0.601
CSIRO_2329
methylmalonyl-CoA mutase.
       0.560
CSIRO_2323
Hypothetical protein.
 
     0.537
CSIRO_1703
Hypothetical protein.
  
  
  0.503
CSIRO_2559
WD40-like repeat-containing protein.
  
     0.483
CSIRO_3210
Hypothetical protein.
 
     0.471
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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