STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_2431Type I secretion system ATPase. (715 aa)    
Predicted Functional Partners:
CSIRO_2432
Type I secretion membrane fusion protein.
  
 0.918
CSIRO_2430
Hypothetical protein.
 
     0.884
CSIRO_2933
HlyD family secretion protein.
  
 0.793
CSIRO_2960
HlyD family secretion protein.
  
 0.712
CSIRO_2428
Hypothetical protein.
 
     0.710
CSIRO_2963
Flagellar hook-length control protein.
 
 
 
 0.563
CSIRO_2433
Cellulose biosynthesis protein.
 
     0.545
CSIRO_2434
Hypothetical protein.
 
   
 0.515
CSIRO_2900
ABC transporter, periplasmic substrate-binding protein.
     
 0.460
CSIRO_2932
HlyB/MsbA family ABC transporter.
  
  
 
0.444
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.