CSIRO_2435 protein (Bradyrhizobiaceae bacterium SG6C)

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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Score

CSIRO_2435

ATP-binding protein of ABC transporter. (540 aa)

Predicted Functional Partners:

CSIRO_4010

0.856

rpsB

0.777

rplU

0.776

rpsC

0.773

rplD

0.772

rpsO

0.768

rpmD

0.767

rpmH

0.766

rplC

0.766

rpsJ

0.764

Your Current Organism:

Bradyrhizobiaceae bacterium SG6C

NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CSIRO_2435	CSIRO_4010	CSIRO_2435	CSIRO_4010	ATP-binding protein of ABC transporter.	ABC transporter permease protein.	0.856
CSIRO_2435	rplC	CSIRO_2435	CSIRO_3500	ATP-binding protein of ABC transporter.	LSU ribosomal protein L3p; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	0.766
CSIRO_2435	rplD	CSIRO_2435	CSIRO_3499	ATP-binding protein of ABC transporter.	LSU ribosomal protein L4p; Forms part of the polypeptide exit tunnel.	0.772
CSIRO_2435	rplU	CSIRO_2435	CSIRO_0786	ATP-binding protein of ABC transporter.	LSU ribosomal protein L21p; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.776
CSIRO_2435	rpmD	CSIRO_2435	CSIRO_3482	ATP-binding protein of ABC transporter.	LSU ribosomal protein L30p.	0.767
CSIRO_2435	rpmH	CSIRO_2435	CSIRO_0528	ATP-binding protein of ABC transporter.	LSU ribosomal protein L34p; Belongs to the bacterial ribosomal protein bL34 family.	0.766
CSIRO_2435	rpsB	CSIRO_2435	CSIRO_2750	ATP-binding protein of ABC transporter.	SSU ribosomal protein S2p; Belongs to the universal ribosomal protein uS2 family.	0.777
CSIRO_2435	rpsC	CSIRO_2435	CSIRO_3494	ATP-binding protein of ABC transporter.	SSU ribosomal protein S3p; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.773
CSIRO_2435	rpsJ	CSIRO_2435	CSIRO_3501	ATP-binding protein of ABC transporter.	SSU ribosomal protein S10p; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.	0.764
CSIRO_2435	rpsO	CSIRO_2435	CSIRO_1127	ATP-binding protein of ABC transporter.	SSU ribosomal protein S15p; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.768
CSIRO_4010	CSIRO_2435	CSIRO_4010	CSIRO_2435	ABC transporter permease protein.	ATP-binding protein of ABC transporter.	0.856
rplC	CSIRO_2435	CSIRO_3500	CSIRO_2435	LSU ribosomal protein L3p; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	ATP-binding protein of ABC transporter.	0.766
rplC	rplD	CSIRO_3500	CSIRO_3499	LSU ribosomal protein L3p; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	LSU ribosomal protein L4p; Forms part of the polypeptide exit tunnel.	0.999
rplC	rplU	CSIRO_3500	CSIRO_0786	LSU ribosomal protein L3p; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	LSU ribosomal protein L21p; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.992
rplC	rpmD	CSIRO_3500	CSIRO_3482	LSU ribosomal protein L3p; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	LSU ribosomal protein L30p.	0.995
rplC	rpmH	CSIRO_3500	CSIRO_0528	LSU ribosomal protein L3p; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	LSU ribosomal protein L34p; Belongs to the bacterial ribosomal protein bL34 family.	0.935
rplC	rpsB	CSIRO_3500	CSIRO_2750	LSU ribosomal protein L3p; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	SSU ribosomal protein S2p; Belongs to the universal ribosomal protein uS2 family.	0.994
rplC	rpsC	CSIRO_3500	CSIRO_3494	LSU ribosomal protein L3p; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	SSU ribosomal protein S3p; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.997
rplC	rpsJ	CSIRO_3500	CSIRO_3501	LSU ribosomal protein L3p; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	SSU ribosomal protein S10p; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.	0.997
rplC	rpsO	CSIRO_3500	CSIRO_1127	LSU ribosomal protein L3p; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	SSU ribosomal protein S15p; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.992