STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_2446TRAP dicarboxylate transporter. (198 aa)    
Predicted Functional Partners:
CSIRO_2445
TRAP dicarboxylate transporter.
 
 
 0.963
dctM
TRAP dicarboxylate transporter, DctM subunit.
 
 
 0.898
CSIRO_2443
TRAP transporter solute receptor; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.
 
 
  0.855
CSIRO_2444
TRAP transporter solute receptor; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.
 
 
  0.855
CSIRO_0461
TRAP transporter solute receptor; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.
 
 
  0.854
CSIRO_1008
TRAP-type C4-dicarboxylate transport system.
 
 
 0.828
CSIRO_1006
TRAP-type C4-dicarboxylate transport system.
 
 
  0.800
CSIRO_1637
TRAP dicarboxylate transporter DctM subunit.
 
  
  0.501
CSIRO_4003
TRAP-like transport system, small permease component.
   
 
  0.462
moaA
Molybdenum cofactor biosynthesis protein MoaA; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.
       0.459
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.