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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_2461GCN5-related N-acetyltransferase. (155 aa)    
Predicted Functional Partners:
CSIRO_2462
(R)-citramalate synthase; Belongs to the alpha-IPM synthase/homocitrate synthase family.
    
  0.835
cysS
cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
    
 0.769
CSIRO_2463
Putative lyase.
    
  0.750
CSIRO_4001
Hypothetical protein.
  
     0.633
tal
Transaldolase/ glucose-6-phosphate isomerase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the GPI family.
  
 
 0.595
CSIRO_2460
Hypothetical protein.
       0.588
CSIRO_1107
Putative phosphotransferase.
 
 
 0.531
CSIRO_1147
Putative molecular chaperone.
  
 0.531
CSIRO_0261
Hypothetical protein.
  
     0.517
CSIRO_0516
GCN5-related N-acetyltransferase.
  
     0.507
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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