STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_2475Alcohol dehydrogenase. (340 aa)    
Predicted Functional Partners:
CSIRO_2479
Acyl carrier protein.
 
  
 0.921
CSIRO_2477
3-oxoacyl-(acyl carrier protein) synthase II; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
  
  0.903
CSIRO_2474
Lauroyl acyltransferase.
 
   
 0.866
CSIRO_2476
3-oxoacyl-(acyl-carrier-protein) synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
  0.807
CSIRO_2478
(3R)-hydroxymyristoyl-(acyl carrier protein) dehydratase.
 
  
  0.725
CSIRO_2101
Aldehyde dehydrogenase.
   
 0.662
CSIRO_0368
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 0.652
CSIRO_2624
Alcohol dehydrogenase.
  
 
0.651
CSIRO_2735
methylmalonyl-CoA epimerase.
    
  0.648
CSIRO_3418
S-(hydroxymethyl) glutathione dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
     
0.623
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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