Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
CSIRO_2475Alcohol dehydrogenase. (340 aa)    
Predicted Functional Partners:
CSIRO_2479
Acyl carrier protein.
 
 
 0.958
CSIRO_2477
3-oxoacyl-(acyl carrier protein) synthase II; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
  
  0.916
CSIRO_2474
Lauroyl acyltransferase.
 
     0.889
CSIRO_2476
3-oxoacyl-(acyl-carrier-protein) synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
  0.834
CSIRO_2101
Aldehyde dehydrogenase.
    
  0.794
CSIRO_0368
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
    
  0.773
CSIRO_2624
Alcohol dehydrogenase.
 
  
0.771
CSIRO_2478
(3R)-hydroxymyristoyl-(acyl carrier protein) dehydratase.
 
  
  0.757
CSIRO_3418
S-(hydroxymethyl) glutathione dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
     
 0.750
CSIRO_2735
methylmalonyl-CoA epimerase.
    
  0.721
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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