STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rcsFProtein RcsF. (235 aa)    
Predicted Functional Partners:
CSIRO_2487
Metal-dependent hydrolase; Involved in phosphonate metabolism.
 
     0.932
CSIRO_2488
Chloramphenicol acetyltransferase.
 
     0.914
phnI
PhnI protein.
 
  
  0.911
phnJ
PhnJ protein; Catalyzes the breakage of the C-P bond in alpha-D-ribose 1- methylphosphonate 5-phosphate (PRPn) forming alpha-D-ribose. Belongs to the PhnJ family.
 
  
  0.910
phnN
ATP-binding protein PhnN / Guanylate kinase.
 
  
  0.903
phnH
PhnH protein.
 
  
  0.891
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
  
 
 0.836
CSIRO_2500
Metal-dependent hydrolase; Involved in phosphonate metabolism.
 
     0.796
phnG
PhnG protein.
 
     0.793
phnL
Phosphonates transport ATP-binding protein PhnL.
 
     0.782
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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