STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_2513Cytochrome c4. (109 aa)    
Predicted Functional Partners:
CSIRO_2123
Sulfide dehydrogenase flavoprotein chain precursor.
 
 
 0.985
ccoO
Cytochrome c oxidase subunit CcoO.
 
 0.959
ccoN
Cytochrome c oxidase subunit CcoN; Belongs to the heme-copper respiratory oxidase family.
 
 0.957
CSIRO_1723
Ubiquinol--cytochrome c reductase cytochrome B subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
 
 
 0.929
CSIRO_2514
L-sorbosone dehydrogenase.
 
  
 0.909
CSIRO_1722
Ubiquinol-cytochrome C reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
 
  
 0.769
CSIRO_3947
Fe-S protein.
 
  
 0.757
CSIRO_3420
Quino(hemo)protein alcohol dehydrogenase.
  
 
 0.741
CSIRO_1943
Tungsten-containing formate dehydrogenase beta subunit.
   
 
  0.687
CSIRO_1322
Cytochrome c oxidase polypeptide III.
 
  
 0.668
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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