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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_2517Hydroxypyruvate isomerase; Belongs to the hyi family. (262 aa)    
Predicted Functional Partners:
CSIRO_2518
Putative pyridoxine biosynthesis protein.
 
 
 0.926
CSIRO_2516
D-beta-hydroxybutyrate dehydrogenase.
 
 0.836
CSIRO_4180
Glyoxylate carboligase; Belongs to the TPP enzyme family.
 
 
 0.657
CSIRO_2515
Ribulose-5-phosphate 4-epimerase-like protein.
 
  
 0.651
CSIRO_4182
2-hydroxy-3-oxopropionate reductase.
 
 0.570
CSIRO_0603
D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
 
 0.456
CSIRO_2269
Hypothetical protein.
 
  
  0.421
CSIRO_0157
D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
  0.418
CSIRO_2177
D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
  0.418
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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