STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cynSCyanate hydratase; Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide; Belongs to the cyanase family. (160 aa)    
Predicted Functional Partners:
CSIRO_2522
Cyanate ABC transporter, substrate binding protein.
 
   
 0.923
CSIRO_2521
Cyanate ABC transporter, permease protein.
 
   
 0.900
CSIRO_2520
Cyanate ABC transporter, ATP-binding protein.
 
   
 0.876
CSIRO_1072
Carbonic anhydrase.
  
 
 0.752
CSIRO_2523
Transcriptional regulator.
 
     0.669
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
     
 0.647
CSIRO_0172
Sulfate permease.
     
 0.557
CSIRO_1154
Hypothetical protein.
     
 0.557
CSIRO_2916
Nitrate ABC transporter, permease protein.
 
   
 0.457
CSIRO_2915
Nitrate ABC transporter, nitrate-binding protein.
 
   
 0.418
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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