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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_2524Transglutaminase-like domain-containing protein. (1110 aa)    
Predicted Functional Partners:
CSIRO_2525
Protein of unknown function DUF404, DUF407, DUF403.
 
  
 0.939
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
  
 
  0.772
CSIRO_1791
Transglutaminase-like domain-containing protein.
 
     0.741
CSIRO_0314
Transglutaminase-like protein.
 
     0.730
CSIRO_1013
GMP synthase.
  
 
  0.726
CSIRO_2450
Phosphoglycolate phosphatase; Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress. Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family.
    
  0.723
surE
5-nucleotidase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.
    
  0.723
CSIRO_3624
Hypothetical protein.
    
  0.723
CSIRO_0860
Hypothetical protein.
  
  
  0.715
CSIRO_2526
Putative cysteine protease.
 
    
0.677
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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