Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_2524Transglutaminase-like domain-containing protein. (1110 aa)    
Predicted Functional Partners:
CSIRO_2525
Protein of unknown function DUF404, DUF407, DUF403.
 
  
 0.945
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
  
 
  0.890
purH
IMP cyclohydrolase/ phosphoribosylaminoimidazolecarboxamide formyltransferase; Bifunctional.
     
  0.820
soxB
Sulfur oxidation protein SoxB; Belongs to the 5'-nucleotidase family.
    
  0.820
CSIRO_1791
Transglutaminase-like domain-containing protein.
 
     0.740
CSIRO_2526
Putative cysteine protease.
 
    
0.740
CSIRO_0314
Transglutaminase-like protein.
 
     0.729
CSIRO_1013
GMP synthase.
  
 
  0.720
surE
5-nucleotidase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.
    
  0.720
CSIRO_3624
Hypothetical protein.
    
  0.718
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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