STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_2615Ethanolamine ammonia-lyase heavy chain. (464 aa)    
Predicted Functional Partners:
CSIRO_2614
Ethanolamine ammonia-lyase light chain; Belongs to the EutC family.
 
 0.999
CSIRO_2616
3-oxoacyl-(acyl-carrier protein) reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
  0.576
CSIRO_1957
Alcohol dehydrogenase.
    
 0.571
CSIRO_2185
Iron-containing alcohol dehydrogenase.
    
 0.571
CSIRO_0368
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.407
CSIRO_1615
Aldehyde dehydrogenase/ coniferyl aldehyde dehydrogenase; Bifunctional; Belongs to the aldehyde dehydrogenase family.
  
 
 0.407
CSIRO_1963
Succinate-semialdehyde dehydrogenase (NADP+); Belongs to the aldehyde dehydrogenase family.
  
 
 0.407
CSIRO_2101
Aldehyde dehydrogenase.
  
 
 0.407
CSIRO_2536
Methylmalonate-semialdehyde dehydrogenase.
  
 
 0.407
paaN
Phenylacetic acid degradation protein PaaN, ring-opening aldehyde dehydrogenase.
  
 
 0.407
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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