STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pepACytosol aminopeptidase PepA; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides. (500 aa)    
Predicted Functional Partners:
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
 
  
  0.792
CSIRO_3736
Lignostilbene-alpha,beta-dioxygenase.
     
 0.735
CSIRO_1460
Peptidase B; Belongs to the peptidase M17 family.
  
  
 
0.697
gshB
Glutathione synthetase; Belongs to the prokaryotic GSH synthase family.
   
 
 0.696
CSIRO_0404
Gamma-glutamyltranspeptidase.
  
  
 0.686
CSIRO_0981
Gamma-glutamyltranspeptidase.
  
 
 0.679
CSIRO_2876
Cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
    
 0.659
CSIRO_3008
Cysteine synthase B.
    
 0.659
CSIRO_0178
Aspartate aminotransferase.
   
  0.654
CSIRO_2632
DNA polymerase III chi subunit.
  
  
 0.652
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.