STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_2689Diguanylate phosphodiesterase. (413 aa)    
Predicted Functional Partners:
CSIRO_0920
Two-component hybrid sensor and regulator.
 0.984
CSIRO_1555
Two-component hybrid sensor and regulator.
 0.976
CSIRO_2346
Two-component sensor histidine kinase.
 0.957
CSIRO_4274
Putative PAS/PAC sensor protein.
  
 0.955
leuS
leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
   0.952
CSIRO_0358
Diguanylate cyclase/phosphodiesterase.
0.925
CSIRO_1207
Hypothetical protein.
 
0.923
CSIRO_0741
Two-component sensor histidine kinase.
 0.920
CSIRO_0215
Metal dependent phosphohydrolase.
 0.916
CSIRO_0589
Hypothetical protein.
 
0.915
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.