STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_2701Hypothetical protein. (1043 aa)    
Predicted Functional Partners:
CSIRO_3561
TonB-dependent receptor.
  
     0.688
CSIRO_2650
Hypothetical protein.
  
     0.684
CSIRO_2702
Hypothetical protein.
       0.591
CSIRO_2704
Hypothetical protein.
       0.590
CSIRO_2700
Hypothetical protein.
       0.559
CSIRO_2703
Hypothetical protein.
       0.559
CSIRO_3412
Hypothetical protein.
  
     0.470
CSIRO_0464
Carotenoid cis-trans isomerase.
  
     0.467
CSIRO_0770
Trehalose-6-phosphate phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
   
    0.465
CSIRO_3510
Hypothetical protein.
  
     0.447
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.