STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_2708Beta-lactamase-like protein. (279 aa)    
Predicted Functional Partners:
CSIRO_2123
Sulfide dehydrogenase flavoprotein chain precursor.
   
 0.760
CSIRO_3926
Nucleoside-diphosphate-sugar epimerase.
 
  
  0.618
CSIRO_2707
Transcriptional regulator, TetR family.
       0.501
CSIRO_4093
Hypothetical protein.
   
  0.472
CSIRO_0731
Rhodanese-related sulfurtransferase.
   
  0.463
CSIRO_2471
Hypothetical protein.
   
  0.463
CSIRO_3927
Putative DNA-binding protein.
  
 
  0.461
CSIRO_1313
Putative thioredoxin.
  
 
  0.439
CSIRO_3091
Lactoylglutathione lyase.
     
 0.437
CSIRO_0382
Protein of unknown function DUF882.
  
    0.436
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.