STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_2789Competence protein. (452 aa)    
Predicted Functional Partners:
CSIRO_2767
ComEC/Rec2-related protein.
 
     0.974
smf
Rossmann fold nucleotide-binding protein Smf.
 
  
 0.768
CSIRO_2788
Hypothetical protein.
       0.608
radC
DNA repair protein RadC; Belongs to the UPF0758 family.
 
  
 0.599
CSIRO_0662
Competence protein F-like protein.
 
  
 0.598
CSIRO_0906
ComM-like protein.
 
  
 0.462
recO
DNA recombination and repair protein RecO; Involved in DNA repair and RecF pathway recombination.
  
   
 0.445
CSIRO_0948
DNA polymerase III delta subunit.
 
   
 0.433
CSIRO_0900
Endonuclease; Belongs to the UPF0102 family.
  
    0.408
CSIRO_1283
Putative glycosyl transferase.
  
    0.401
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.