STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_2826Putative iron binding protein from the HesB/IscA/SufA family; Belongs to the HesB/IscA family. (112 aa)    
Predicted Functional Partners:
CSIRO_3683
Monothiol glutaredoxin; Belongs to the glutaredoxin family. Monothiol subfamily.
 
 0.877
CSIRO_3576
Putative iron-sulfur cluster assembly scaffold protein.
  
  
 0.856
CSIRO_3158
Cysteine desulfurase.
 
 
 0.845
prfA
Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.
     
 0.756
nifU
NifU protein.
  
 
 0.649
CSIRO_0647
DnaJ-like domain-containing protein.
     
 0.647
dnaJ
Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...]
     
 0.647
CSIRO_1825
DnaJ-like molecular chaperone.
     
 0.647
CSIRO_3384
DnaJ-like heat shock protein.
     
 0.647
cbpA
DnaJ-class molecular chaperone CbpA.
     
 0.647
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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