CSIRO_2830 protein (Bradyrhizobiaceae bacterium SG6C)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

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experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

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[Homology]

Score

CSIRO_2830

Sporulation domain protein. (493 aa)

Predicted Functional Partners:

ftsA

0.966

ftsQ

0.958

ftsI

0.919

CSIRO_3812

0.918

ftsW

0.909

CSIRO_2809

0.875

ftsX

0.856

CSIRO_2357

0.850

mtgA

0.827

CSIRO_1220

0.827

Your Current Organism:

Bradyrhizobiaceae bacterium SG6C

NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CSIRO_1220	CSIRO_2357	CSIRO_1220	CSIRO_2357	Transpeptidase-transglycosylase; Bifunctional.	Transpeptidase / transglycosylase; Bifunctional.	0.798
CSIRO_1220	CSIRO_2830	CSIRO_1220	CSIRO_2830	Transpeptidase-transglycosylase; Bifunctional.	Sporulation domain protein.	0.827
CSIRO_1220	ftsA	CSIRO_1220	CSIRO_4063	Transpeptidase-transglycosylase; Bifunctional.	Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.	0.423
CSIRO_1220	ftsI	CSIRO_1220	CSIRO_4079	Transpeptidase-transglycosylase; Bifunctional.	Cell division protein FtsI.	0.955
CSIRO_1220	ftsW	CSIRO_1220	CSIRO_4074	Transpeptidase-transglycosylase; Bifunctional.	Cell division protein FtsW; Belongs to the SEDS family.	0.850
CSIRO_1220	mtgA	CSIRO_1220	CSIRO_0688	Transpeptidase-transglycosylase; Bifunctional.	Peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family.	0.821
CSIRO_2357	CSIRO_1220	CSIRO_2357	CSIRO_1220	Transpeptidase / transglycosylase; Bifunctional.	Transpeptidase-transglycosylase; Bifunctional.	0.798
CSIRO_2357	CSIRO_2830	CSIRO_2357	CSIRO_2830	Transpeptidase / transglycosylase; Bifunctional.	Sporulation domain protein.	0.850
CSIRO_2357	ftsA	CSIRO_2357	CSIRO_4063	Transpeptidase / transglycosylase; Bifunctional.	Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.	0.452
CSIRO_2357	ftsI	CSIRO_2357	CSIRO_4079	Transpeptidase / transglycosylase; Bifunctional.	Cell division protein FtsI.	0.955
CSIRO_2357	ftsW	CSIRO_2357	CSIRO_4074	Transpeptidase / transglycosylase; Bifunctional.	Cell division protein FtsW; Belongs to the SEDS family.	0.846
CSIRO_2357	mtgA	CSIRO_2357	CSIRO_0688	Transpeptidase / transglycosylase; Bifunctional.	Peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family.	0.819
CSIRO_2809	CSIRO_2830	CSIRO_2809	CSIRO_2830	Septum formation initiator.	Sporulation domain protein.	0.875
CSIRO_2809	ftsA	CSIRO_2809	CSIRO_4063	Septum formation initiator.	Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.	0.840
CSIRO_2809	ftsI	CSIRO_2809	CSIRO_4079	Septum formation initiator.	Cell division protein FtsI.	0.958
CSIRO_2809	ftsQ	CSIRO_2809	CSIRO_4064	Septum formation initiator.	Cell division protein FtsQ; Essential cell division protein; Belongs to the FtsQ/DivIB family. FtsQ subfamily.	0.981
CSIRO_2809	ftsW	CSIRO_2809	CSIRO_4074	Septum formation initiator.	Cell division protein FtsW; Belongs to the SEDS family.	0.971
CSIRO_2809	ftsX	CSIRO_2809	CSIRO_1586	Septum formation initiator.	Cell division protein FtsX.	0.822
CSIRO_2830	CSIRO_1220	CSIRO_2830	CSIRO_1220	Sporulation domain protein.	Transpeptidase-transglycosylase; Bifunctional.	0.827
CSIRO_2830	CSIRO_2357	CSIRO_2830	CSIRO_2357	Sporulation domain protein.	Transpeptidase / transglycosylase; Bifunctional.	0.850