Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_2841CheY-like response regulator protein. (107 aa)    
Predicted Functional Partners:
CSIRO_4108
Hypothetical protein.
 
 0.964
CSIRO_2365
Sensory box histidine kinase/response regulator.
 
 0.960
CSIRO_3755
Multi-sensor hybrid histidine kinase.
   
 0.932
CSIRO_1494
Hypothetical protein.
 
  
 0.867
CSIRO_2016
Two-component hybrid sensor and regulator.
 
 
 0.835
CSIRO_3180
Putative two-component sensor histidine kinase.
 
 0.814
CSIRO_1027
Two-component response regulator.
  
  0.807
CSIRO_1792
Signal transduction histidine kinase.
 
  
  0.797
CSIRO_0297
Signal transduction histidine kinase.
 
  
  0.786
CSIRO_0345
PAS/PAC sensor signal transduction histidine kinase.
   
 0.779
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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