Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_2883Beta-(1-3)-glucosyl transferase. (885 aa)    
Predicted Functional Partners:
CSIRO_3634
Dolichol-phosphate mannosyltransferase-like protein.
  
 
 0.811
CSIRO_1207
Hypothetical protein.
  
 
 0.807
CSIRO_3835
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
 
 0.788
CSIRO_0272
TPR domain-containing protein.
  
 0.754
CSIRO_2433
Cellulose biosynthesis protein.
  
 0.740
CSIRO_3406
TPR repeat-containing protein.
  
 0.740
CSIRO_2833
Beta N-acetyl-glucosaminidase.
     
 0.726
CSIRO_3262
Hypothetical protein.
    
 0.714
CSIRO_2957
Maltodextrin glucosidase.
     
 0.699
CSIRO_0684
Diguanylate cyclase/phosphodiesterase.
  
 
 0.689
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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