Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
lamBLactam utilization protein LamB; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate. (255 aa)    
Predicted Functional Partners:
CSIRO_2925
Allophanate hydrolase 2 subunit 1.
 
 0.999
CSIRO_2924
Allophanate hydrolase 2 subunit 2.
 
 0.998
CSIRO_2203
Hypothetical protein; Belongs to the D-glutamate cyclase family.
 
    0.881
CSIRO_0268
Glutamate synthase (NADPH) large chain.
     
  0.849
CSIRO_2653
Glutamine synthetase.
   
 
  0.770
CSIRO_0270
Glutamate synthase (NADPH) small chain.
     
  0.768
CSIRO_0404
Gamma-glutamyltranspeptidase.
     
  0.768
CSIRO_0981
Gamma-glutamyltranspeptidase.
     
  0.768
CSIRO_1310
Glutamate--cysteine ligase; Catalyzes the synthesis of gamma-glutamylcysteine (gamma-GC). Belongs to the glutamate--cysteine ligase type 2 family. EgtA subfamily.
     
  0.768
CSIRO_1399
Proline dehydrogenase/ delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
     
  0.768
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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