STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lamBLactam utilization protein LamB; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate. (255 aa)    
Predicted Functional Partners:
CSIRO_2925
Allophanate hydrolase 2 subunit 1.
 
 0.998
CSIRO_2924
Allophanate hydrolase 2 subunit 2.
 
 0.997
CSIRO_1399
Proline dehydrogenase/ delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
   
 
  0.891
CSIRO_2203
Hypothetical protein; Belongs to the D-glutamate cyclase family.
 
    0.879
CSIRO_0313
Hypothetical protein.
    
  0.631
CSIRO_2653
Glutamine synthetase.
   
 
  0.619
CSIRO_2209
NAD-specific glutamate dehydrogenase/ NADP-specific glutamate dehydrogenase; Bifunctional; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
    
  0.616
CSIRO_0368
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 
  0.573
CSIRO_1615
Aldehyde dehydrogenase/ coniferyl aldehyde dehydrogenase; Bifunctional; Belongs to the aldehyde dehydrogenase family.
   
 
  0.573
CSIRO_1963
Succinate-semialdehyde dehydrogenase (NADP+); Belongs to the aldehyde dehydrogenase family.
   
 
  0.573
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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