STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_2926Hypothetical protein. (234 aa)    
Predicted Functional Partners:
CSIRO_4164
Fumarylacetoacetate hydrolase family protein.
 
   
  0.889
CSIRO_1611
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway).
 
   
  0.878
CSIRO_2662
NAD-dependent malic enzyme.
     
 0.755
CSIRO_3427
Dihydrodipicolinate synthase; Belongs to the DapA family.
 
  
  0.743
CSIRO_1448
5-methyltetrahydrofolate--homocysteine methyltransferase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
     
 0.665
CSIRO_1652
Polysialic acid capsule sugar isomerase; Belongs to the SIS family. GutQ/KpsF subfamily.
    
  0.617
CSIRO_2924
Allophanate hydrolase 2 subunit 2.
       0.576
CSIRO_2925
Allophanate hydrolase 2 subunit 1.
       0.576
lamB
Lactam utilization protein LamB; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.
       0.529
CSIRO_1974
Hypothetical protein.
    
 0.495
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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