Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_2930Hypothetical protein. (281 aa)    
Predicted Functional Partners:
CSIRO_2959
ABC transporter.
 
   
 0.732
CSIRO_2958
Agglutination protein.
 
   
 0.723
CSIRO_2960
HlyD family secretion protein.
 
   
 0.722
cysC
Sulfate adenylyltransferase subunit 1/ adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate.
     
  0.705
CSIRO_1511
Sulfate adenylyltransferase subunit 2.
     
 0.439
CSIRO_1207
Hypothetical protein.
 
 
 
 0.434
CSIRO_1516
Phosphoadenylyl-sulfate reductase/ adenylyl-sulfate reductase; Reduction of activated sulfate into sulfite.
     
  0.432
soxB
Sulfur oxidation protein SoxB; Belongs to the 5'-nucleotidase family.
     
  0.429
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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