Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_2960HlyD family secretion protein. (381 aa)    
Predicted Functional Partners:
CSIRO_2959
ABC transporter.
 0.990
CSIRO_2958
Agglutination protein.
 
 0.970
CSIRO_2308
TolC precursor.
 
 0.845
CSIRO_2961
Hypothetical protein.
 
   
 0.844
CSIRO_2990
Type I secretion outer membrane protein.
 
 0.837
CSIRO_3005
NodT family RND efflux system.
  
 0.785
CSIRO_4141
Hypothetical protein.
  
 0.775
CSIRO_2963
Flagellar hook-length control protein.
 
 
 0.755
CSIRO_2932
HlyB/MsbA family ABC transporter.
 
  
 0.732
CSIRO_2431
Type I secretion system ATPase.
 
  
 0.730
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.