Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
CSIRO_2970enoyl-CoA hydratase. (380 aa)    
Predicted Functional Partners:
paaG
phenylacetate-CoA oxygenase, PaaG subunit.
  
 
 0.830
paaJ
phenylacetate-CoA oxygenase, PaaJ subunit.
  
 
 0.823
paaI
phenylacetate-CoA oxygenase, PaaI subunit.
  
 
 0.815
CSIRO_2310
Enoyl CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 
0.808
CSIRO_3221
enoyl-CoA hydratase.
  
 
0.807
paaH
phenylacetate-CoA oxygenase, PaaH subunit.
  
 
 0.803
paaN
Phenylacetic acid degradation protein PaaN, ring-opening aldehyde dehydrogenase.
  
 0.799
CSIRO_2538
3-hydroxyisobutyryl-CoA hydrolase.
  
 
0.781
CSIRO_1409
acyl-CoA dehydrogenase-like protein.
  
  0.769
CSIRO_3962
enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 
0.763
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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