hfq protein (Bradyrhizobiaceae bacterium SG6C)

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hfq

RNA-binding protein Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family. (82 aa)

Predicted Functional Partners:

CSIRO_3281

0.905

hflX

0.840

clpX

0.808

dksA

0.806

CSIRO_1715

0.776

CSIRO_2977

0.757

CSIRO_0744

0.716

CSIRO_0956

0.716

CSIRO_2822

0.716

acpP

0.697

Your Current Organism:

Bradyrhizobiaceae bacterium SG6C

NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CSIRO_0744	CSIRO_0956	CSIRO_0744	CSIRO_0956	Exodeoxyribonuclease III.	Exodeoxyribonuclease III.	0.825
CSIRO_0744	CSIRO_2822	CSIRO_0744	CSIRO_2822	Exodeoxyribonuclease III.	Exodeoxyribonuclease III.	0.768
CSIRO_0744	hfq	CSIRO_0744	CSIRO_2975	Exodeoxyribonuclease III.	RNA-binding protein Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family.	0.716
CSIRO_0956	CSIRO_0744	CSIRO_0956	CSIRO_0744	Exodeoxyribonuclease III.	Exodeoxyribonuclease III.	0.825
CSIRO_0956	CSIRO_2822	CSIRO_0956	CSIRO_2822	Exodeoxyribonuclease III.	Exodeoxyribonuclease III.	0.810
CSIRO_0956	hfq	CSIRO_0956	CSIRO_2975	Exodeoxyribonuclease III.	RNA-binding protein Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family.	0.716
CSIRO_1715	clpX	CSIRO_1715	CSIRO_2705	tRNA nucleotidyltransferase; Bifunctional; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.	ATP-dependent Clp protease ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.	0.411
CSIRO_1715	hfq	CSIRO_1715	CSIRO_2975	tRNA nucleotidyltransferase; Bifunctional; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.	RNA-binding protein Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family.	0.776
CSIRO_2822	CSIRO_0744	CSIRO_2822	CSIRO_0744	Exodeoxyribonuclease III.	Exodeoxyribonuclease III.	0.768
CSIRO_2822	CSIRO_0956	CSIRO_2822	CSIRO_0956	Exodeoxyribonuclease III.	Exodeoxyribonuclease III.	0.810
CSIRO_2822	hfq	CSIRO_2822	CSIRO_2975	Exodeoxyribonuclease III.	RNA-binding protein Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family.	0.716
CSIRO_2977	hflX	CSIRO_2977	CSIRO_2974	Transcriptional regulator, Fis family.	GTP-binding protein HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.	0.520
CSIRO_2977	hfq	CSIRO_2977	CSIRO_2975	Transcriptional regulator, Fis family.	RNA-binding protein Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family.	0.757
CSIRO_3281	acpP	CSIRO_3281	CSIRO_2617	Integration host factor, alpha subunit; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family.	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	0.890
CSIRO_3281	dksA	CSIRO_3281	CSIRO_3780	Integration host factor, alpha subunit; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family.	DksA/TraR family protein; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters.	0.592
CSIRO_3281	hfq	CSIRO_3281	CSIRO_2975	Integration host factor, alpha subunit; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family.	RNA-binding protein Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family.	0.905
acpP	CSIRO_3281	CSIRO_2617	CSIRO_3281	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	Integration host factor, alpha subunit; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family.	0.890
acpP	dksA	CSIRO_2617	CSIRO_3780	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	DksA/TraR family protein; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters.	0.609
acpP	hflX	CSIRO_2617	CSIRO_2974	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	GTP-binding protein HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.	0.745
acpP	hfq	CSIRO_2617	CSIRO_2975	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	RNA-binding protein Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family.	0.697

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