Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
CSIRO_3012Glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family. (346 aa)    
Predicted Functional Partners:
CSIRO_3010
Amino acid ABC transporter, permease protein.
 
 0.989
CSIRO_3009
ABC transporter related protein.
 
 0.988
CSIRO_3011
ABC-type amino acid transport system periplasmic component.
 
 
 0.987
CSIRO_2365
Sensory box histidine kinase/response regulator.
   
 0.871
CSIRO_4010
ABC transporter permease protein.
     
 0.867
CSIRO_2900
ABC transporter, periplasmic substrate-binding protein.
  
 
 0.770
CSIRO_0711
Extracellular solute-binding protein, family 3; Belongs to the bacterial solute-binding protein 3 family.
     
  0.768
CSIRO_2490
Phosphonate ABC transporter phosphate-binding periplasmic component.
  
  
 0.763
CSIRO_3420
Quino(hemo)protein alcohol dehydrogenase.
    
 0.753
pstS
Phosphate ABC transporter, periplasmic phosphate-binding protein PstS; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family.
    
 0.748
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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