STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_3018Transpeptidase / transglycosylase; Bifunctional. (706 aa)    
Predicted Functional Partners:
CSIRO_3019
Alpha-2-macroglobulin.
   
 0.919
CSIRO_3170
Multimodular transpeptidase-transglycosylase; Bifunctional.
  
  
0.694
mtgA
Peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family.
  
  
 
0.672
ftsI
Cell division protein FtsI.
     
 0.657
CSIRO_3020
Hypothetical protein.
       0.542
CSIRO_3017
Glycosyl transferase.
       0.534
CSIRO_1220
Transpeptidase-transglycosylase; Bifunctional.
  
  
0.513
CSIRO_2357
Transpeptidase / transglycosylase; Bifunctional.
  
  
0.508
CSIRO_3016
Phosphatidylglycerophosphatase B.
       0.502
CSIRO_1527
D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family.
     
 0.458
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.