STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
paaXPhenylacetic acid degradation operon negative regulatory protein PaaX. (297 aa)    
Predicted Functional Partners:
paaG
phenylacetate-CoA oxygenase, PaaG subunit.
 
   
 0.896
paaH
phenylacetate-CoA oxygenase, PaaH subunit.
 
   
 0.857
paaI
phenylacetate-CoA oxygenase, PaaI subunit.
 
  
 0.851
paaJ
phenylacetate-CoA oxygenase, PaaJ subunit.
 
   
 0.836
paaK
phenylacetate-CoA oxygenase/reductase, PaaK subunit.
 
   
 0.750
cobB
SIR2 family NAD-dependent protein deacetylase; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class U subfamily.
   
    0.681
CSIRO_3106
Phenylacetic acid degradation protein.
 
   
 0.639
CSIRO_3119
Hypothetical protein.
       0.441
CSIRO_3105
enoyl-CoA hydratase.
 
   
 0.418
CSIRO_3108
Transcriptional regulator, TetR family.
 
     0.405
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
Server load: medium (80%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.