Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_3133Acetyltransferase. (149 aa)    
Predicted Functional Partners:
CSIRO_3132
Haloacid dehalogenase type II.
  
    0.838
CSIRO_3134
GlpX-like fructose-1,6-bisphosphatase.
       0.815
CSIRO_3135
Homoserine dehydrogenase.
    
 0.758
recJ
single-stranded-DNA-specific exonuclease RecJ.
       0.666
CSIRO_3136
Aspartate aminotransferase.
 
  
 0.606
CSIRO_1147
Putative molecular chaperone.
  
 
 0.497
phnI
PhnI protein.
  
 
  0.464
CSIRO_1107
Putative phosphotransferase.
    
 0.437
CSIRO_3720
Transcriptional regulator, AraC family.
 
  
 0.433
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
 
  
 0.428
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.