STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_3152Iron binding protein SufA for iron-sulfur cluster assembly; Belongs to the HesB/IscA family. (113 aa)    
Predicted Functional Partners:
CSIRO_3158
Cysteine desulfurase.
 
 
 0.952
sufB
Iron-sulfur cluster assembly protein SufB.
  
 
 0.947
CSIRO_3810
Ferredoxin.
 
 
 0.924
CSIRO_3576
Putative iron-sulfur cluster assembly scaffold protein.
  
  
 0.910
CSIRO_3683
Monothiol glutaredoxin; Belongs to the glutaredoxin family. Monothiol subfamily.
 
 0.884
sufC
Iron-sulfur cluster assembly ATPase protein SufC.
  
 
 0.838
sufD
Iron-sulfur cluster assembly protein SufD.
  
 
 0.834
CSIRO_3154
Cysteine desulfurase, SufS subfamily; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
  
 0.780
prfA
Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.
     
 0.756
nifU
NifU protein.
 
 
 0.754
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.