STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sufBIron-sulfur cluster assembly protein SufB. (492 aa)    
Predicted Functional Partners:
sufD
Iron-sulfur cluster assembly protein SufD.
 
0.999
sufC
Iron-sulfur cluster assembly ATPase protein SufC.
 0.999
CSIRO_3154
Cysteine desulfurase, SufS subfamily; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
 
 0.995
CSIRO_3152
Iron binding protein SufA for iron-sulfur cluster assembly; Belongs to the HesB/IscA family.
  
 
 0.947
CSIRO_3153
PaaD-like protein.
 
   
 0.944
CSIRO_3576
Putative iron-sulfur cluster assembly scaffold protein.
 
 
 0.935
sufE
Sulfur acceptor protein SufE.
 
 
 0.868
CSIRO_3158
Cysteine desulfurase.
  
 
 0.833
CSIRO_2826
Putative iron binding protein from the HesB/IscA/SufA family; Belongs to the HesB/IscA family.
  
 
 0.511
CSIRO_3159
Hypothetical protein.
     
 0.459
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
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