STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSIRO_3211Transcriptional regulator, ArsR family. (107 aa)    
Predicted Functional Partners:
CSIRO_3210
Hypothetical protein.
 
    0.942
CSIRO_3209
Hypothetical protein.
 
     0.787
CSIRO_3208
Hypothetical protein.
 
     0.766
CSIRO_2284
Transcriptional regulator, ArsR family.
  
     0.727
CSIRO_2565
Putative glutathione S-transferase-related transmembrane protein.
 
    0.669
CSIRO_1576
Putative glutathione S-transferase-related transmembrane protein.
 
    0.639
CSIRO_0304
Putative glutathione S-transferase-related transmembrane protein.
 
    0.493
CSIRO_3207
Rrf2 family transcriptional regulator.
  
  
 0.449
Your Current Organism:
Bradyrhizobiaceae bacterium SG6C
NCBI taxonomy Id: 709797
Other names: B. bacterium SG-6C, Bradyrhizobiaceae bacterium SG-6C
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.